PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thecc1EG021602t1
Common NameTCM_021602
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
Family BES1
Protein Properties Length: 169aa    MW: 18606 Da    PI: 9.8977
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thecc1EG021602t1genomeCGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822127.91.2e-3935125492
            DUF822   4 grkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl..eeaeaagssasaspes 92 
                        r pt+ Er +nk+RERrRRa+a  i+aGL+++Gnyklpk+aD n+ lkALc+eAGw ve+DGt yrk +      ++   g+ +++  ++
  Thecc1EG021602t1  35 YRFPTENERQKNKQRERRRRAVAQNIFAGLKEHGNYKLPKHADANDLLKALCQEAGWHVEEDGTIYRKKTVSStmAASVENGEAKDQDYCT 125
                       589****************************************************************877665344444444444444443 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056873.4E-3635125IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    Send to blast
MAGEKKTTLR GCIKKSKGPW IVHRATKDGG IVTRYRFPTE NERQKNKQRE RRRRAVAQNI  60
FAGLKEHGNY KLPKHADAND LLKALCQEAG WHVEEDGTIY RKKTVSSTMA ASVENGEAKD  120
QDYCTCNDHG NVLPASGTFL SVGQSQECSG INLVLSLSVS NSLTRNVS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007026585.11e-125Brassinosteroid signaling positive regulator family protein
TrEMBLA0A061ERT91e-125A0A061ERT9_THECC; Brassinosteroid signaling positive regulator family protein
STRINGPOPTR_0016s13350.13e-60(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM1959767
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50750.11e-18BES1/BZR1 homolog 1
Publications ? help Back to Top
  1. Motamayor JC, et al.
    The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color.
    Genome Biol., 2013. 14(6): p. r53
    [PMID:23731509]